CDS

Accession Number TCMCG057C24311
gbkey CDS
Protein Id XP_018486066.1
Location join(10731664..10732155,10732238..10732447,10732558..10732695,10732777..10732920,10733235..10733327,10733434..10733622)
Gene LOC108856700
GeneID 108856700
Organism Raphanus sativus

Protein

Length 421aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018630564.1
Definition PREDICTED: lysine-specific demethylase JMJ30 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category BT
Description Cupin superfamily protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K10277        [VIEW IN KEGG]
EC 1.14.11.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000086        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010452        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016278        [VIEW IN EMBL-EBI]
GO:0016279        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0016705        [VIEW IN EMBL-EBI]
GO:0016706        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018024        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0044839        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046975        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051864        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070544        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGGAGCCACCACCGCCGCTTCCTCCGGAAACAACCACAGCCTCCATCTCCCGACCCCAACCCTCGACGCCGAGTCGCAGTCCCTCCTGCAATCCATCTCCGCTCAAGGCGGTTACGCCTACGCTCGCATGGCGGCGCTAGCAGTCGCCGGCGACCGAAGCGCGGCGGAGGCGGCGCGTGATATGGCCTGGGAGCAGCTCCACTCCGGCCCCTGGCACTCCGTTCTCCCCGTCTGGCGCGACGCCTACTCCATGGCGTGTCTCCGCGTCGCCAAGTTCCACTTCGCCGCCGGGGAGTTCGGGGAAGCCCTCGGCGCGCTCGACATGGGTCTCATCATGGGCGGGATGCTTCTCCGCAAGGACCTCCACGACTCTGTGCTCTTGGTCTCCTCCGAGGCTCGCAAGAAGGCCAAGAATAGTCTCCAAGCTTCCGGAGAAGATTTCAAGGGTGAGAAGTTGGTCCCTGAAGTTCCCGTCGACGTCAATGAGGTGCTAAAGATTCTACCTTTGAGGTCGTTGAGTAGTGGAAGAGTAGAGAAGAGGTCTGATTTATCTATGGAGGGGTTTCTGCGTAATTATTTTCAGACAGGTACGCCTGTTGTTATAACCAACTGTATGGCTCATTGGCCTGCTAGGACCAAGTGGAACCACTTGGACTATCTCAACGCTGTCGCTGGTAACCGTACCGTTCCCGTCGAGGTGGGGAAAAACTATTTGTGTTCTGATTGGAAGCAAGAGCTTGTGACTTTCTCCAAGTTCCTTGAACGGATGAGGACCAATAGATCCACGTCGTCCGTGGAGCCTACTTATCTTGCTCAGCATCCCTTGTTTGACCAGATAAATGAACTGAGAGATGATATATGTATTCCTGATTACTGTTTTGTCGGTGGAGGGGAACTCCAATCTCTTAATGCTTGGTTTGGCCCGGCTGGGACAGTCACCCCATTACACCATGATCCACATCATAATATACTTGCTCAGGTTGTTGGTAAGAAGTATATAAGGCTTTACCCATCCTCGTTGCAAGACGAACTTTACCCTTATTCTGAGACAATGCTTTGCAACTCTAGCCAGGTTGATCTTGACAACATTGACAAGAACGAGTTCCCAAAGGCGGTGGAGCTAGAGTTTATGGATTGTATCCTAGAGGAAGGCGAGATGTTGTACATCCCTCCCAAATGGTGGCACTATGTCAGGTCTTTAACAATGAGTTTCTCGGTTAGCTTCTGGTGGAGCAATGAAACAGAGTCATCTGATTCGTAG
Protein:  
MSGATTAASSGNNHSLHLPTPTLDAESQSLLQSISAQGGYAYARMAALAVAGDRSAAEAARDMAWEQLHSGPWHSVLPVWRDAYSMACLRVAKFHFAAGEFGEALGALDMGLIMGGMLLRKDLHDSVLLVSSEARKKAKNSLQASGEDFKGEKLVPEVPVDVNEVLKILPLRSLSSGRVEKRSDLSMEGFLRNYFQTGTPVVITNCMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMRTNRSTSSVEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSSLQDELYPYSETMLCNSSQVDLDNIDKNEFPKAVELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNETESSDS